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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs2006945 chr2:33001865 G/A 8.29E-13 113 46.43 26.57 0.9 KM Plot
THYM rs201316228 chr3:9859107 C/CA 0 109 37.27 54.9 9.07 KM Plot
THYM rs201364160 chr9:97003985 AT/A 0 111 38.58 61.78 0.13 KM Plot
THYM rs202012410 chr1:45804431 G/GT 3.08E-6 111 14.47 38.33 42.9 KM Plot
THYM rs202184086 chr12:26770695 G/GGGAGGGAA 0 108 42.82 35.67 0.13 KM Plot
THYM rs2029415 chr8:82715058 T/A 4.45E-5 113 42.82 35.77 22.5 KM Plot
THYM rs2029416 chr8:82714327 A/G 4.45E-5 113 42.82 35.77 22.5 KM Plot
THYM rs2087448 chr8:82686425 T/C 7.04E-5 112 42.25 36.4 22.5 KM Plot
THYM rs2087449 chr8:82686534 G/T 7.04E-5 112 42.25 36.4 22.5 KM Plot
THYM rs2101513 chr8:82686780 G/A 7.04E-5 112 42.25 36.4 22.5 KM Plot
THYM rs2110464 chr7:76137375 A/G 2.35E-5 113 25.83 46.23 39.5 KM Plot
THYM rs2112783 chr16:24812512 C/T 4.11E-5 113 46.07 28.8 50.1 KM Plot
THYM rs2188717 chr16:24730230 T/C 3.57E-8 111 25.12 27.33 46.27 KM Plot
THYM rs226492 chr22:45714489 T/C 8.72E-5 108 32.7 50.07 39.75 KM Plot
THYM rs2286988 chr7:76142536 G/A 3.38E-5 109 44.02 44.3 25.83 KM Plot